[gmx-users] Solvent

[Anton Feenstra]

Dmytro wrote:
> 
> Hi,
> 
> I'm prepearing the system for simulation. After genbox I'm doing md with
> posres of protein atoms. From the very begining  solvent rapidly
> desrease its own volume and becomes more dence. In my box holes start to
> appear ! Genbox generated solvent molecules with default  pressure.
> I'didn't used pressure coupling in the posres. What it coulbd be related
> for?

What solvent is that?


-- 
Groetjes,

Anton
 _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|(   |   )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands   |
| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610           |
|             | Feenstra at chem.vu.nl - www.chem.vu.nl/~feenstra/       |
|             | "I'm Not Gonna Die Here !" (Sphere)                   |
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