[gmx-users] (no subject)
David van der Spoel
spoel at xray.bmc.uu.se
Wed Jan 1 20:43:53 CET 2003
On 1 Jan 2003 pqchen at eyou.com wrote:
>Dear David:
> From the literature I know the torsion parameters of NA-CW-CT-CT in
>fourier form is V1=2.344 kcal/mol, V2=-0.076 kcal/mol, V3=-1.224 kcal/mol,but
>I
>don't know the parameters of V0. So I can't sucessfully translate the OPLS
>parametes to RB parameters.
> Can I use the fourier form parameters in the topol file?
> For example:
>; ai aj ak al funtc .................
> NA CW CT CT 1 0.000 9.814 1 180.000 -0.318 2 0.000 5.125
>3
It looks superficially OK, but when you don't have V0 it is problematic.
Of course it can be zero. Try plotting the potential if nothing else helps
David.
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