[gmx-users] Segmentation fault
spoel at xray.bmc.uu.se
Sun Jan 19 15:57:52 CET 2003
On Sun, 2003-01-19 at 09:07, Itamar Kass wrote:
> HI all, I have gromacs 3.1.5 on a OSX 10.2.3 box, it run grate, till
> I try to pre-compile the mdrun file. When I write "grompp -f md.mdp -c
> m2.gro -r m2.gro -p m2.top -o m2_vacou.tpr" the machine answer
> "Segmentation fault". Now, I know the machine hate me, but I can I
> over come it?
It depends. MacOS X had some quirks until recently, and you seem to have
the latest version which may not have been tested.
Anyway, do you have access to a different machine with gromacs (e.g.
Linux)? That would be useful to test whether the problem is in the OS or
in Gromacs. If all else fails you can send me a tar file containing all
your input files (off the list).
Dr. David van der Spoel, Dept. of Cell and Molecular Biology
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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