[gmx-users] CHelpG charges on Fe-PPIX
Valentin Gogonea
v.gogonea at csuohio.edu
Wed Jan 22 13:29:13 CET 2003
Dear CCLers and GMX users,
A couple of months ago I asked a question about what van der Waals
radius should be used for Fe(2+) to obtain CHelpG charges (to be used
with OPLS parameters). I got few replies and consequently, following
the suggestions from the list I tried few exploratory calculations on
Fe(2+)-porphyrin IX (without axial ligands). I am listing here the
results obtained for different van der Waals radii in the range of
1.00-2.00A:
CHelpG charges for Fe(2+)-PPIX
Total Charge=0, Multip=5
Radius-Fe(A) Charge(au)
1.0 4.226756
1.2 3.069658
1.5 0.943646
1.7 -0.342193
2.0 -1.644652
Mulliken charge is 0.318069
Radius for C,N,O is 1.50A and for H 1.45A (Breneman model as
implemented in Gaussian98)
There is a large variability in the charges and I am wondering how to
get a value which is acceptable. Further MD simulations will clearly
depend on the charge values. I used UHF/LanL2DZ basis set on Fe and
STO-3G for the atoms in the porphyrin ring.
I would really appreciate any suggestions on how to proceed in order to
get acceptable charges for Fe.
Thank you,
Valentin Gogonea
Cleveland State University
Cleveland, Ohio, USA
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