[gmx-users] more bond in oplssaa than gromacs,why ?

[David van der Spoel]

On Wed, 2003-07-09 at 09:55, s8026264 wrote:
> Dear All
> 
> I have a molecule with 177 bond.
> 
> 
> when I use pdb2gmx with gromacs force field, I will have 177 bond but
> 
> when I use pdb2gmx with oplssaa force field, I will have 250 bond
> 
how about the extra hydrogens? gromacs/gromos uses united atoms
> Why ?
> 
> Sincerely yours
> 
> 
> Mojtaba Alaei
> _______________________________________________
> gmx-users mailing list
> gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell & Mol. Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++