[gmx-users] PDB file

Jay Mashl mashl at uiuc.edu
Wed Jul 9 20:37:01 CEST 2003


On Wed, 9 Jul 2003, Albert Sun wrote:
> Dear Gromax users
> Appreciate if you could explain to me the meaning of each column of the PDB file(as shown below in example)?  how should we create a PDB file for an epoxy polymer simulation?
>
> ATOM      1  N   LYS      1      24.966  -0.646  22.314  1.00 32.74      1SRN  99

[snip]


The Protein Data Bank online (http://www.rcsb.org/pdb) explains it all.
Follow the links:  About PBS -> File Formats and Standards -> PDB File Format.

Jay




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