[gmx-users] pdb2gro

Bert de Groot bgroot at gwdg.de
Wed Jul 23 09:17:01 CEST 2003

Milan Melichercik wrote:
> Hi all,
> I've downloaded a DMPC membrane from Dr. Peter Tieleman's site
> (http://moose.bio.ucalgary.ca/Downloads), but when I've tried to convert it
> into .gro and .top by using pdb2gmx, I've got this message:

for membranes you don't need pdb2gmx. At Peter's website you'll also find
the necessary .itp files which you can include in your topology. And at
you'll find the neccessary force field files.


Dr. Bert de Groot

Max Planck Institute for Biophysical Chemistry
Theoretical molecular biophysics group
Am Fassberg 11 
37077 Goettingen, Germany

tel: +49-551-2011306, fax: +49-551-2011089

email: bgroot at gwdg.de

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