[gmx-users] DSSP and Windows.
Diego Enry Barreto Gomes
diego_enry at ajato.com.br
Mon Jul 28 22:34:01 CEST 2003
Thanks Erik, the SET command worked to assign the variable, but now
with Windows, I am having the same problem I had while using Mandrake
Linux 9.1 and Red Hat Linux 8.
Here is the problem:
do_dssp reads the -f and -s files, asks wich group I want. Then it
starts reading the first frame, creates temp files, uses the processor
at 100% but nothing happens.
dssp "standalone" works correctly in all systems.
Any idea of what is going on ?
Em Seg, 2003-07-28 às 09:20, Alan Wilter Sousa da Silva escreveu:
> BTW, is do_dssp working fine in Linux?
> On Sun, 27 Jul 2003, Erik Lindahl wrote:
> > I think you should use the command 'SET' in your shell (you can add it
> > to the default shell variables in Windows NT/2000/XP too), or possibly
> > only assign the path to a variable (i.e. VAR=C:\path\...)
> > Cheers,
> > Erik
> > On Sunday, July 27, 2003, at 06:19 PM, Diego Enry wrote:
> > > Is there any way to use do_dssp with Windows ?
> > >
> > > I have got the DSSP binary for Windows but I don´t know how to solve
> > > the "setenv DSSP" issue under Windows.
> > > How can I tell GROMACS that DSSP is at "C:\GROMACS\bin" instead of
> > > "/usr/local/bin/dssp".
> > >
> > > Cheers,
> > > Diego Enry.
More information about the gromacs.org_gmx-users