[gmx-users] Alkene parameters source - force constant for unsaturated lipid cis double bond
Michal Bachar
mbachar at ucalgary.ca
Thu Jun 5 19:32:01 CEST 2003
Hello,
Does anyone have a reference as a source for Alkene improper angle force
constant (cis double bond) as applied for unsaturated lipids? I'm using
the value of 167.3 kJ/mol*rad^2.
I checked in the following references, yet the number did not originate
from there:
Feller SE, Yin DX, Pastor RW, Mac-Kerell AD. J. AM. CHEM.,
124(2),318-326, 1997, . Molecular dynamics simulation of unsaturated
lipid bilayers at low hydration: parameterization and comparison with
diffraction studies.
Biophysical Journal, 72, 2002-2013, 2002, Molecular dynamics simulations
of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration,
constant pressure, and constant temperature, O Berger, O Edholm and F
Jahnig
Thank you,
Michal Bachar
Department of Chemistry
University of Calgary
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