[gmx-users] viewing the trajectory

David spoel at xray.bmc.uu.se
Fri Jun 6 21:58:00 CEST 2003


On Fri, 2003-06-06 at 21:36, Vivek Raut wrote:
> i have a .trr & .edr file.
> 
> i want to see the trajectory running. how do i do that?
ngmx -s tprfile -f trrfile
> 
> also from the .trr file i want to track the z- coordinate of a particular 
> molecule. how do i do that?
make an index file for that molecule and use g_traj

> -------------------------------------------------------------------------------------------------------------------------------------------
> Vivek Raut
> Graduate Research Assistant
> Department of Bioengineering
> Clemson University
> Clemson, SC- 29631. USA
> Email: vraut at clemson.edu
> Phone: 864-650-1431
> --------------------------------------------------------------------------------------------------------------------------------------------
> 
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell and Molecular Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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