[gmx-users] Potassium ions in OPLS-AA (II)
Lieven Buts
lieven at ultr.vub.ac.be
Wed Jun 18 16:22:00 CEST 2003
I have just (re)discovered an updated "ions.itp"
(posted by David van der Spoel) which defines
residue types [ NA+ ] and [ K+ ]. These work
fine, but I still don't understand why the [ K ]
definition in 3.1.4 ffoplsaa.rtp doesn't work.
ions.itp (updated):
------------------
#ifdef _FF_OPLS
...
[ moleculetype ]
; molname nrexcl
NA+ 1
[ atoms ]
; id at type res nr residu name at name cg nr charge
mass
1 opls_407 1 NA+ NA 1 1
22.98977
[ moleculetype ]
; molname nrexcl
K+ 1
[ atoms ]
; id at type res nr residu name at name cg nr charge
mass
1 opls_408 1 K+ K 1 1
39.0983
...
ffoplsaa.rtp (3.1.4):
--------------------
...
[ NA ]
[ atoms ]
NA opls_407 1.000 0 ; Jorgensen ion type would be opls_405
[ K ]
[ atoms ]
K opls_408 1.000 0
...
--
Lieven Buts
Brussels Free University
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