[gmx-users] Calculation of energy components for solute only
David
spoel at xray.bmc.uu.se
Thu Jun 19 20:01:01 CEST 2003
On Thu, 2003-06-19 at 19:24, Pratul K. Agarwal wrote:
> Hi,
>
> May be this is a trivial question -- Is there a way to
> calculate the energy components for solute and solvent
> separately? My system is protein in water and I am
> interested in calculating the energy components of
> protein only (without the water-water terms).
yes use energy groups see manual ch 3
>
> Any input will be greatly appreciated.
>
> Pratul
>
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--
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, Dept. of Cell and Molecular Biology
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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