[gmx-users] new installation

David spoel at xray.bmc.uu.se
Sun Jun 22 17:42:01 CEST 2003


On Mon, 2003-06-23 at 03:37, Kay Gottschalk wrote:
> Thanks, now it works fine. BTW: what is an API?
Application Programming Interface,
i.e. how the library routines should be called...
> Cheers,
> K.
> On Sunday, June 22, 2003, at 08:06 AM, David wrote:
> 
> > On Mon, 2003-06-23 at 02:45, Kay Gottschalk wrote:
> >> Hi there,
> >>
> >> I just installed gromacs on a new G4 with Mac os X. First I installed
> >> fftw-3.0 with --enable-mpi and --enable-float (seemed to work, at  
> >> least
> >> there were no complains), and then I tried to install Gromacs with
> >> --enable-mpi. It complained that it didn't find fftw_mpi.h and
> >> rfftw_mpi.h. Any ideas? As a 'workaround' I did 'ln -s fftw.h
> >> fftw_mpi.h'. Gromacs seems to work, but did I commit an unforgivable
> >> sin? I don't know why the fftw_mpi libraries apparently were not
> >> installed in the first place.
> > fftw 3.0 is not supported yet, the API has changed. Erik has updated  
> > the
> > gromacs code to take advantage of it, but it is hasn't been released
> > yet.
> >
> > Please downgrade your fftw to 2.1.5
> >> Thanks, Kay.
> >>
> >> _______________________________________________
> >> gmx-users mailing list
> >> gmx-users at gromacs.org
> >> http://www.gromacs.org/mailman/listinfo/gmx-users
> >> Please don't post (un)subscribe requests to the list. Use the
> >> www interface or send it to gmx-users-request at gromacs.org.
> > --  
> > Groeten, David.
> > _______________________________________________________________________ 
> > _
> > Dr. David van der Spoel, 	Dept. of Cell and Molecular Biology
> > Husargatan 3, Box 596,  	75124 Uppsala, Sweden
> > phone:	46 18 471 4205		fax: 46 18 511 755
> > spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
> > +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 
> > +
> > _______________________________________________
> > gmx-users mailing list
> > gmx-users at gromacs.org
> > http://www.gromacs.org/mailman/listinfo/gmx-users
> > Please don't post (un)subscribe requests to the list. Use the
> > www interface or send it to gmx-users-request at gromacs.org.
> >
> >
> Dr. Kay-E. Gottschalk
> Department of Biological Chemistry
> Weizmann Institute of Science
> Tel: ++972-8-9343639
> Herzl St. 1
> Rehovot 76100
> Israel
> 
> _______________________________________________
> gmx-users mailing list
> gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell and Molecular Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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