[gmx-users] computation time

[Nagy, Peter I.]

Dear Gromacs Users!

    I am a novice in these calculations, and we are going to set up a
  computer system for MD calculations.
     My typical systems consist of about 40,000 atoms including SPC water
  atoms. If I want to perform a regular MD calculation for 1-2 ns and
  perhaps fixing the bond lengths, how much real time should I expect for
  completing the calculation either on

    1. Dual Pentium 4 Xeon, 2.4 GHz, 2G RAM

  or

    2. Dual Mac G5, 2.0 GHz, 2G RAM

   Thanks for your help.

                                         Peter Nagy

                                         Dept. Med. Biol. Chem.
                                         The University of Toledo
                                         Toledo OH, 43606 USA

                                         pnagy at utnet.utoledo.edu 
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