[gmx-users] installation problem

[Ruben Martinez Buey]

Hi all,

OK, I take out tgroup.h form the ./include/Makefile
make
make install

And, then, I want to install the double precision version, so:

make distclean

./configure --prefix=/r1/cicyt/e4149/gromacs --disable-float
--program-suffix=_d --enable-mpi

make

Making all in src
        cd .. \
          && CONFIG_FILES= CONFIG_HEADERS=src/config.h \
             /bin/sh ./config.status
config.status: creating src/config.h
config.status: src/config.h is unchanged
        make  all-recursive
Making all in gmxlib
        source='3dview.c' object='3dview.lo' libtool=yes \
        depfile='.deps/3dview.Plo' tmpdepfile='.deps/3dview.TPlo' \
        depmode=sgi /bin/sh ../../config/depcomp \
        /bin/sh ../../libtool --mode=compile cc -DHAVE_CONFIG_H -I. -I.
-I../../src   -I../../include -DGMXLIBDIR=\"/r1/cicyt/e4149/gromacs/share/top\"
-I/r1/cicyt/e4149/fftw/include  -O3 -OPT:IEEE_arithmetic=3 -OPT:rsqrt=ON
-SWP:loop_overhead -INLINE:=ON -LNO:opt=1 -LNO:ou_further=3
-OPT:Olimit=0:roundoff=3:alias=typed -woff 1174 -D__INLINE_INTRINSICS -c -o
3dview.lo `test -f 3dview.c || echo './'`3dview.c
cc -DHAVE_CONFIG_H -I. -I. -I../../src -I../../include
"-DGMXLIBDIR=\"/r1/cicyt/e4149/gromacs/share/top\""
-I/r1/cicyt/e4149/fftw/include -O3 -OPT:IEEE_arithmetic=3 -OPT:rsqrt=ON
-SWP:loop_overhead -INLINE:=ON -LNO:opt=1 -LNO:ou_further=3
-OPT:Olimit=0:roundoff=3:alias=typed -woff 1174 -D__INLINE_INTRINSICS -c
3dview.c -Wp,-MDupdate,.deps/3dview.TPlo -o 3dview.o
cc-1005 cc: ERROR File = 3dview.c, Line = 34
  The source file "sysstuff.h" is unavailable.

  #include "sysstuff.h"
                       ^

1 catastrophic error detected in the compilation of "3dview.c".
Compilation terminated.
*** Error code 1 (bu21)
*** Error code 1 (bu21)
*** Error code 1 (bu21)
*** Error code 1 (bu21)

Thanks a lot for your kind attention
with best wishes,
Ruben



>
> > Thanks a lot for your reply,
> > I´ve tried:
> >
> > ./configure --prefix=/r1/cicyt/e4149/gromacs --enable-mpi
> > touch include/tgroup.h
> > make
> > make install
> >
> > ...
> >  /r1/cicyt/e4149/gromacs-3.1.4/config/install-sh -m 644 rmpbc.h
> > /r1/cicyt/e4149/gromacs/include/rmpbc.h
> >  /r1/cicyt/e4149/gromacs-3.1.4/config/install-sh -m 644 ./tgroup.h
> > /r1/cicyt/e4149/gromacs/include/tgroup.h
> > install:  ./tgroup.h does not exist
> > *** Error code 1 (bu21)
> > *** Error code 1 (bu21)
> > *** Error code 1 (bu21)
> > *** Error code 1 (bu21)
> >
> > Any idea?
> > Thanks again for your kind attention,
> > with best regards,
>
> edit the Makefile and take out group.h




>
>
>

--
___________________________________________

Rubén Martínez-Buey. PhD student
Protein Function and Structure Dept. Lab. 352
Centro de Investigaciones Biológicas (CIB-CSIC)
C/ Velázquez, 144  28006  MADRID
Tlf: +34-91-561 18 00 ext. 4380
___________________________________________


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