[gmx-users] spatial distribution function

Anton Feenstra feenstra at chem.vu.nl
Mon Mar 10 18:26:52 CET 2003


Christoph Freudenberger wrote:
> Hi there,
> 
> I would like to analyse SDF's from gromacs trjectories.
> AFAIK there is no SDF-tool provided in offical gromacs (yet)...
> 
> Has anybody already done that and could give some tips/code?

There is a tool to calculate density profiles, which is mainly used
for membranes, e.g. the water density along the bilayer normal. I
don't know for sure if it is in the distribution, though I expect
it is.


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610           |
|             | Feenstra at chem.vu.nl - www.chem.vu.nl/~feenstra/       |
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