[gmx-users] Normal Mode Analysis

[Matthew Lardy]

Hi all,

Is there some limit of peptide size when performing normal mode analysis?
I have been trying, unsuccessfully, to perform normal mode analysis of a
peptide pulled from the PDB Databank.  The protein 2BBM, chain A, is about
150 residues.  If there is some sort of upper limit to normal mode
analysis, what is it?  I am losing my mind of this.  :)

Thanks in advance,
Matthew