[gmx-users] Normal Mode Analysis

[Bert de Groot]

Matthew Lardy wrote:
> 
> Hi all,
> 
> Is there some limit of peptide size when performing normal mode analysis?

yes, the amount of memory in your machine :-)
(or the limit set for memoryuse/vmemoryuse, type 'limit' to see your settings)

--

Bert

____________________________________________________________________________
Dr. Bert de Groot

Max Planck Institute for Biophysical Chemistry
Theoretical molecular biophysics group
Am Fassberg 11 
37077 Goettingen, Germany

tel: +49-551-2011306, fax: +49-551-2011089

email: bgroot at gwdg.de
http://www.mpibpc.gwdg.de/abteilungen/071/bgroot
____________________________________________________________________________