[gmx-users] Merging topologies of Non-peptidic molecules with proteins

[Sergio Manzetti]

Dear GMX users...after generating a topology of NADPH from the PRODREG 
server, I wish to make the topology of the Portein-NADPH complex. The 
problem is that I don't know where to insert the topology of the NADPH in 
the protein topology...is it independent of where I insert it?

Sergio