[gmx-users] mdrun_d error with mpi

Ruben Martinez Buey ruben at akilonia.cib.csic.es
Thu Mar 13 00:00:40 CET 2003


Hi all,

I get the next error message when try to use mdrun compiled in double precission on a Silicon Origon 3800:

Coul be the problem of the compilation?

Thanks alot for your help

with best wishes,

Ruben

jen50 52% mpirun -np 8 /r1/cicyt/e4149/gromacs/mips-sgi-irix6.5/bin/mdrun_d -s 1FSZ.tpr -o steep.trr -c 1FSZ_em_steep.gro -e steep.edr -g steep.log -np 8

NNODES=8, MYRANK=0, HOSTNAME=jen50
NNODES=8, MYRANK=1, HOSTNAME=jen50
NNODES=8, MYRANK=3, HOSTNAME=jen50
NNODES=8, MYRANK=4, HOSTNAME=jen50
NNODES=8, MYRANK=5, HOSTNAME=jen50
NNODES=8, MYRANK=2, HOSTNAME=jen50
NNODES=8, MYRANK=6, HOSTNAME=jen50
NNODES=8, MYRANK=7, HOSTNAME=jen50
NODEID=0 argc=13
NODEID=1 argc=13
NODEID=2 argc=13
NODEID=3 argc=13
NODEID=4 argc=13
NODEID=5 argc=13
NODEID=6 argc=13
NODEID=7 argc=13

:-)  G  R  O  M  A  C  S  (-:

              GROningen Mixture of Alchemy and Childrens' Stories

                            :-)  VERSION 3.1.4  (-:

Steepest Descents:
   Tolerance         =  1.00000e-04
   Number of steps   =         1000
MPI: MPI_COMM_WORLD rank 1 has terminated without calling MPI_Finalize()
MPI: Received signal 11

--
___________________________________________

Rubén Martínez-Buey. PhD student
Protein Function and Structure Dept. Lab. 352
Centro de Investigaciones Biológicas (CIB-CSIC)
C/ Velázquez, 144  28006  MADRID
Tlf: +34-91-561 18 00 ext. 4380
___________________________________________


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