[gmx-users] Acceleration Line
David
spoel at xray.bmc.uu.se
Fri Nov 7 08:15:01 CET 2003
On Fri, 2003-11-07 at 03:13, Albert Sun wrote:
> Dear Users,
>
> I found that accelerate line did not work when mdrun.
>
> In these mdruns, I did not apply pressure coupling, and temperature
> coupling.
>
> I tested 4 accelerate values respectively from 1.0e-5, 1.0, 1.0e10
> to 1.0e+25 for whole system.
>
> the system has no movement.
>
> Do you think it is right?
you probably are removing the center of mass motion
units are MD units (chapter 2)
>
> Thanks
>
> Albert
>
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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