[gmx-users] Generate specific protein forcefield and topology

[David]

On Sat, 2003-11-08 at 01:06, Yuhua Song wrote:
> Hi,
> 
> I am planning to do some analysis of the protein interaction with the
> biomembrane using Gromacs. I had got many input for the biomembrane force
> field and topology. I am wondering whether there are some nice program and
> tools suitable for generating the topology and force field of specific
> protein that is not available in current Gromacs forcefield?
> 
please be more specific. all proteins consisting of natural amino acids
can be treated in gromacs
> 
> Thanks,
> 
> 
> Yuhua
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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