[gmx-users] g_hbond problem

[Anton Feenstra]

Oleg V. Stroganov wrote:

> Hello Gromacs-users,
> 
> I have the following question: are hydrogen bonds in -hbm output of g_hbond ordered
> identically to the -hbn index? I have used -hbm output and found that
> in my case it is not so: bonds numbers in -hbm seemed to be reversed.

IIRC -hbm outputs an .xpm file? This is organized 'top-to-bottom', and it
could well be that when viewing with e.g. 'xv' the order is opposite from
the .ps output generated when using xpm2ps... Does this help you?


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
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|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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