[gmx-users] visualization error

[Ilya Chorny]

Hello I am having some problems viewing my trajectories using VMD and
ngmx and using g_rms. My xtc file seems to not be compatible with the
trr or tpr file. I get the following error.

Reading frame       0 time    0.000   Fatal error: Molecule in topology
has atom
 numbers below and above natoms (182).
You are probably trying to use a trajectory which does not match the
first 182 a
toms of the run input file.
You can make a matching run input file with tpbconv.

Any help would be appreciated.

Thanks,


Ilya