[gmx-users] pdb2gmx does create bonds b/w DNA bases!
azizelo at yahoo.com
Wed Nov 19 20:37:01 CET 2003
For some reason, the files I downloaded are missing
enteries for bonds and angles, but do have it for
I had another dillema. Is GROMOS96 the best force
field for DNA/RNA? And if there is a better one, is
it easy to make it understandable to GROMACS?
I made specific 5' terminus residue types to deal with
the 5' OH that I have. Is there a more sane way of
doing this, something like CNS's method of 'linking'?
Thanks for all the help.
School of Chemistry and Biochemistry
Georgia Institute of Technology
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