[gmx-users] Performance

[Ran Friedman]

Hi,

Rough data:

1ns simulation of ~22,000 atoms on 8cpu (R12000, 400MHZ) with the gromacs FF, with PME, time step 2fs, takes me 44-48 hours.

Ran.

ehab at biof.ufrj.br wrote:

> Hi all,
> Please, somebody can tell me how is the time performance of GROMACS in a
> Origin 2000? I just need to know the system size, the time of the simulation
> (like 1ns) and the real time it took to run (like 3 days) on this machine.
>
> Thanks in advance,
>
> Elza
>
> *************************************
> Ludwig Institute for Cancer Research
> Computational Biology Lab
> Sao Paulo-SP - Brazil
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--
------------------------------------------------------
Ran Friedman
Laser laboratory for fast reactions in biology
Department of biochemistry
Faculty of life sciences
Tel-Aviv university
972-3-6409824
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