[gmx-users] error

[David]

On Tue, 2003-10-14 at 03:13, CORINA BARBU wrote:
> Hello gmx-users!
> 
> I try to run a simulation on a molecule which is NOT a protein(or other
> biomolecule). No matter which of the ff implemented in gromacs I choose the
> result is this:
> 
> "Fatal error: Residue '' not found in residue topology database."
> 
> I kind of expected it, I imagine that these ff do not have defined at least one
> atomtype that I need for my molecule.
>  
> Where from to start fixing the problem? 
>  
> Does one really need the residue topology database? 
> 
> Or what's the matter?

check out the prodrg server. Link on gromacs website
> 
> Thanks! Corina 
> 
>  
> 
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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