[gmx-users] Re: NEMD (fwd)
David
spoel at xray.bmc.uu.se
Thu Oct 16 08:34:01 CEST 2003
On Wed, 2003-10-15 at 20:59, Luciano Tavares wrote:
>
> Hi Mr. David van der Spoel,
>
> I'm PhD student here in Brazil (USP - University of Sao Paulo). My job is
> to try informations about mechanics properties of a viscoelastic protein
> in solvent medium. Here in laboratory, we have used gromacs generally in
> small systems. There are works about applications of external force in
> NEMD with gromacs.
>
> How Can I to do ?! Do you are with papers or other information about it?!
>
use acceleration on a group of atoms (specify in mdp file).
It is described in the manual.
> I've read the FAQ's and I'm subscribed. Very very thanks!!
I've forwarded this to the list for further discussions
>
> Thank you!!
>
>
>
> ######################################################################
> ## Luciano Tavares da Costa * ltcosta at universiabrasil.net ##
> ## Laboratory of Theoretical Chemistry-DQ UFSCar ##
> ## Caixa Postal 676 | PO Box 676 ##
> ## 13565-905 Sao Carlos - SP | 13565-905 Sao Carlos - SP ##
> ## Brasil | Brazil ##
> ######################################################################
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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