[gmx-users] impropers

[Anton Feenstra]

prasad wrote:

> Dear Gromacs Users,
> 
> In an aliphatic ring , if one of the ring carbon( lets say C1) is bonded to
> two CH3 groups. Can we define it as improper dihedral with  C1 as the
> central atom, C2 , C3 and one CH3 group. because PRODRG defined it as
> improper. Is it correct?

Your description is not very clear to me. Could you try and explain it again?


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
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|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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