[gmx-users] memory problem on Compaq Alpha
Mu Yuguang (Dr)
YGMu at ntu.edu.sg
Wed Oct 22 03:49:01 CEST 2003
Dear Eric, David,
I have install gromacs on Compaq Alpha SC45 here (42 nodes each node
with 4cpu).
It works well for small system.
But when my system is increased to 61K , problems happens
Fatal error: calloc for fr->vdwtab (nelem=204864, elsize=8, file
force.c, line 750): Not enough space
Error on node 1, will try to stop all the nodes
What's your ideas?
I test memory with command limit, it turns out:
cputime unlimited
filesize unlimited
datasize 4194304 kbytes
stacksize 3465214 kbytes
coredumpsize 0 kbytes
memoryuse 4089768 kbytes
vmemoryuse 4194304 kbytes
descriptors 4096
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