[gmx-users] Living out the water

[David]

On Sat, 2003-09-13 at 19:52, Tanos wrote:
>     Dear users,
>     I am trying without success to extract my protein from the water box 
> final .gro file generated in a dynamics. I have used trjconv but it's 
> not working because I don't know the  rigth sequence of flags and 
> options to use. Does someone know how should I proceed ????
>     Lots of thanks in advance.
make_ndx -f topol.tpr << EOF
q
EOF
trjconv -n << EOF
1
EOF



>     Tanos C. C. Franca
>     IME - Rio de Janeiro - Brazil
> 
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-- 
Groeten, David.
________________________________________________________________________
Dr. David van der Spoel, 	Dept. of Cell and Molecular Biology
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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