[gmx-users] cg problem!!!
nanyu101
nanyu101 at sina.com
Wed Sep 17 08:02:01 CEST 2003
Dear gmx-users,
I have tried to minimize the decane slab use steepest decent method, the system run normal,but the max-force is too large.So I want to use cg method to minimize the system, but system told me as following:
Conjugate Gradients:
Tolerance = 5.00000e+02
Number of steps = 200000
F-Norm = nan
My em.mdp file is listed as following:
title = try decane
cpp = /lib/cpp
define = -DFLEX_SPC
constraints = none
integrator = cg
ntcgsteep = 50
nsteps = 200000
nslist = 5
ns_type = grid
pbc = xyz
rlist = 0.9
coulombtype = PME
rcoulomb = 0.9
rvdw = 1.1
fourierspacing = 0.12
fourier_x = 0
fourier_y = 0
fourier_z = 0
pme_order = 4
ewald_rtol = 1e-5
optimize_fft = yes
emtol = 500
emstep = 0.001
Tcoupl = no
pcoupl = no
gen_vel = no
would you please give me some assistants!!!
Best wishes,
Xianhui Wu
______________________________________
Best wishes,
nanyu
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