[gmx-users] Caps of the Peptides

Abhishek Jha ajha at midway.uchicago.edu
Thu Sep 18 23:20:01 CEST 2003

Dear List,
 I am trying to switch to use gmx and the first problem I ran into was
capping my peptide. I can see NME (or NAC) in the aminoacids.dat file and
as well as in ff*.rtp but the pdb2gmx fails to recognize it. Any
suggestion and help will be appreciated.


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