[gmx-users] g_covar calculates the eigenvalues
Jinzhi Tan
jztan at mail.shcnc.ac.cn
Tue Apr 27 09:39:01 CEST 2004
Hi, everyone:
I just used g_covar to get the eigenvalues and eigenvectors. The followings is parts of the eigenval.xvg file. The second volume values are eigenvalues, aren't they? My problem is if I can add all the eigenvalues to get the total value? And then get the percentage of each eigenvalue in total. Just like the first eigenvalue is 3.52687 , the total value is 15.03, then the percentage is 23.4%. I am not sure whether I am right or not. Could you tell me? Thank you very much!
The eigenval.xvg is the following:
1 3.52687
2 2.27773
3 1.14664
4 0.655514
5 0.502613
6 0.386365
7 0.336983
8 0.28379
9 0.2455
10 0.216003
11 0.150509
12 0.145242
13 0.12765
14 0.114315
15 0.108977
16 0.0957201
17 0.0884697
18 0.0846633
19 0.0840747
20 0.0743253
21 0.0720613
22 0.069553
23 0.0686596
24 0.0590817
25 0.0586423
26 0.0553452
27 0.0532252
28 0.0502445
29 0.0486899
30 0.0474396
and so on.
Best wishes,
Jinzhi Tan
*************************************
Shanghai Institute of Meteria Medica
Chinese Academy of Sciences
Shanghai 201203, China
E-mail: tanjinzhi at hotmail.com
jztan at mail.shcnc.ac.cn
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