[gmx-users] g_confrms : fit vs rmsd group

Nuno R. L. Ferreira nunolf at ci.uc.pt
Thu Aug 19 11:46:35 CEST 2004


Hi all

Are the same groups used for the fit of the 2 structures, used for the
calculation of the rmsd, i.e., if I fit two proteins in their backbone, the
calculated rmsd is also calculated between the backbones?

Regards
Nuno

-- 
-----------------------------------------------------
Nuno Ricardo Santos Loureiro da Silva Ferreira
Ph.D student
Grupo de Química Biológica
Departamento de Química
Faculdade de Ciências e Tecnologia
Universidade de Coimbra
3004-535 Coimbra
Portugal
www.biolchem.qui.uc.pt
-----------------------------------------------------
" Do not worry about your dificulties in mathematics.
   I can assure you that mine are still greater."
                                       e=mc2
-----------------------------------------------------






More information about the gromacs.org_gmx-users mailing list