[gmx-users] Draining water from simulation box

[Anton Feenstra]

Gaurav Porwal wrote:

> Dear all,
> 
> After a MD simulation in water, is there a way in which we can remove the
> water from the box so that the end structure is more clearly visible.

All visualization programs (vmd, rasmol, ngmx, whatif, ...) will allow you
to display only a selection of atoms.


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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