[gmx-users] g_confrms : fit vs rmsd group

[Anton Feenstra]

Anton Feenstra wrote:

> Nuno R. L. Ferreira wrote:
> 
>> Hi all
>>
>> Are the same groups used for the fit of the 2 structures, used for the
>> calculation of the rmsd, i.e., if I fit two proteins in their 
>> backbone, the
>> calculated rmsd is also calculated between the backbones?
> 
> 
> Yes.

However, if you need it differently, it wouln't be too hard to change it
in the source (if you know a bit of c).


-- 
Groetjes,

Anton
  _____________ _______________________________________________________
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|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
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