[gmx-users] MPI INTEL and Opteron

David van der Spoel spoel at xray.bmc.uu.se
Fri Dec 3 13:54:11 CET 2004


On Fri, 2004-12-03 at 10:19 -0200, Alan Wilter Sousa da Silva wrote:
> Hi List!
> 
> Simple questions :-).
> 
> We have a cluster with several dual opteron. We 
> heard about using intel compiler 32 bits to improve gmx performance in 
> AMD_64.
> 
> However, I still have to use mpi to run in two processors?
> 
> If so, will lam-mpi work with intel? Is there a trick so?
> 
> I'm starting with:
> gromacs-3.2.1.tar.gz
> fftw-2.1.5.tar.gz
> lam-7.1.1.tar.bz2
> Intel compilers C++ and Fortran version 8.
> 
> At last, am I forgetting something?
No that will work fine.
> 
> Thanks in advance for any suggestion.
> Later I hope to present you all with a small doc about my attempt.
> 
> Cheers,
> Alan
> 
> --------------------------
> Alan Wilter Sousa da Silva
> --------------------------
> D.Sc. - IBCCF/UFRJ
> Projeto BioPAUA - HP/LNCC
> Petrópolis (RJ), Brasil
> www.lncc.br/~alan
> _______________________________________________ gmx-users mailing list gmx-users at gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-request at gromacs.org.
-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,          75124 Uppsala, Sweden
phone:  46 18 471 4205          fax: 46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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