[gmx-users] questions about afm pulling
zouj01 at mails.tsinghua.edu.cn
Tue Dec 14 14:20:38 CET 2004
I ran a test of one spc water in a rectangular box, choosing the ref_group
and pull_group the same (the water), but found from pull.pdo that the speed
of the spring becomes faster and faster.
Perhaps because the displacement of the spring is the displacement of the
ref_group plus that of the afm_rate.
Does anyone have some experience how to deal with this?
Thanks in advance.
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