[gmx-users] pdb2gmx splits residues from protein

[Ghermes Chilov]

Sergey,

does your .PDB have an ID, or is it hand-made?

SP> Hello!
SP> In order to run a simulation I make a *.gro file from a PDB
SP> query with pdb2gmx. My input PDB structure contains 198
SP> residues, but in the output file there are only 187 of them.
SP> This error does not appear with other PDB files. Tell me
SP> please, what may be wrong with this query?

-- 
Best regards,
 Ghermes                            mailto:Ghermes at belozersky.msu.ru