[gmx-users] Setup Box Size

[Nuno R. L. Ferreira]

[...snip...]
>Typically, we use 1.0 nm
> as a minimum spacing for more rigid globular proteins
> and 1.2 nm as a minimum for work with more flexible small polypeptides (as
> reported by McCammon in the paper you reference).  We occasionally go to
> even
[...snip...]

Sorry Dr. Kerrigan. Think I'm not so aware as I suspected to be.
 This minimum spacing reports to the distance between protein/box edge or
protein/protein?

Thanks,
NUno