[gmx-users] issues with demo for gromacs-3.2

[Maria Nemirovskaya]

Hi,

We just installed the new version of Gromacs (3.2) and tried to run
demo with it. Everything executes fine, except in ngmx the system
(both protein and solvent) is placed well outside the boundaries. Did
anyone else encounter the same problem? What is it related to? We
never had such issues with gromacs-3.1.4, so I cannot figure out
what's happening.

Thanks for help,
Maria

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Maria Nemirovskaya
Postdoctoral Research Associate
Dept. of Chemistry, University of Oregon