Osmany Guirola Cruz
osmany.guirola at cigb.edu.cu
Wed Jan 7 14:25:01 CET 2004
First I load my .gro file whitout problem but when I load the .trr file
to see the simulation
VMD begins to draw my protein very bad ... It joins atoms that are not
joined before load the trr file.
These ocurrs in many of the atoms of my system
From: David [mailto:spoel at xray.bmc.uu.se]
Sent: Tuesday, January 06, 2004 3:53 AM
To: gmx-users at gromacs.org
Subject: Re: [gmx-users] ngmx
On Mon, 2004-01-05 at 16:44, Osmany Guirola Cruz wrote:
> I need to know if exist another tool to visualizate
> Trr files I think that ngmx is not the best. I use VMD but it give me
> errors drawing my molecules whith the trajectorie files , I need use
> other tool.
What kind of errors, VMD works reasonably well for most gromacs users...
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David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
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