[gmx-users] Is there an easy way to disable the choice prompt in g_rmsf?

Mu Yuguang (Dr) YGMu at ntu.edu.sg
Wed Jan 7 15:30:01 CET 2004


You can edit a file called "input", in which there are numbers you want
to input, for example, 
0
1
1

Then you can do this in your script file:
 G_rmsf -s .. -f .. -o .. < input



Regards
Yuguang
 
Dr. Yuguang Mu
Division of Computational and Structrual Biology
School of Biological Sciences
Nanyang Technological University
Singapore 637820
Tel: 0065-67906489
Mail: ygmu at ntu.edu.sg

-----Original Message-----
From: Hua Wong [mailto:wong at ebgm.jussieu.fr] 
Sent: Wednesday, January 07, 2004 9:57 PM
To: gmx-users at gromacs.org
Subject: [gmx-users] Is there an easy way to disable the choice prompt
in g_rmsf?

Here is my problem :
I have a hundred SA structures and wish to calculate de RMSF of some
part 
of the molecule. I want to make it automatically using a small shell 
script. But how can I tell g_rmsf the choices I want whitout 
the software pausing his execution to prompt me? Is there 
a file I have to modify or just an option I might have misunderstood?

Thanks

-- 
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