[gmx-users] strange movement

Xavier Periole x.periole at chem.rug.nl
Wed Jan 14 19:01:01 CET 2004

I could be just the consequence of the exit of the first residue of the 
two subunits
of the box limits, which results in a strange reconstruction of your system.
I guess that playing with the -pbc option will fix this problem.

You migh consider constrain the CM of your pentamer at the center of
the box.


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