[gmx-users] G_ANGLE/MK_ANGNDX

[Anton Feenstra]

David wrote:

> On Sun, 2004-01-18 at 10:38, Raj Badhan wrote:
> 
>>Hi all,
>>Just a query, whenever I try making an angle.ndx file using 
>>mk_angndx and the -type phi-psi comment, I get the following 
>>message:

If you only need one (or a few) phi/psi combination(s), you can simply
write the index files yourself. The format is easy and is described in
the manual... Otherwise you can also use make_ndx, and select the
appropriate residue and atoms (that would be N-Ca-C-O and Ca-C-N-Ca).



-- 
Groetjes,

Anton
  _____________ _______________________________________________________
|             |                                                       |
|  _   _  ___,| K. Anton Feenstra                                     |
| / \ / \'| | | Dept. of Pharmacochem. - Vrije Universiteit Amsterdam |
|(   |   )| | | De Boelelaan 1083 - 1081 HV Amsterdam - Netherlands   |
| \_/ \_/ | | | Tel: +31 20 44 47608 - Fax: +31 20 44 47610           |
|             | Feenstra at chem.vu.nl - www.chem.vu.nl/~feenstra/       |
|             | "If You See Me Getting High, Knock Me Down"           |
|             | (Red Hot Chili Peppers)                               |
|_____________|_______________________________________________________|