[gmx-users] g_sas

Dallas Warren dallas.warren at vcp.monash.edu.au
Wed Jan 21 00:41:02 CET 2004

>What do the fields in the output xvg file for g_sas indicate?
>How can you interpret the results in the ouput xvg file?

It is actually written at the top of the output.xvg file.

>@    title "Solvent Accessible Surface"
>@    xaxis  label "Time (ps)"
>@    yaxis  label "Area (nm\S2\N)"
>@TYPE xy
>@ view 0.15, 0.15, 0.75, 0.85
>@ legend on
>@ legend box on
>@ legend loctype view
>@ legend 0.78, 0.8
>@ legend length 2
>@ s0 legend "Hydrophobic"
>@ s1 legend "Hydrophilic"
>@ s2 legend "Total"
>@ s3 legend "D Gsolv"

1st column time (ps), 2nd hydrophobic sas (nm^2) ... etc.

Catch ya,

Dr. Dallas Warren
Research Fellow
Department of Pharmaceutical Biology and Pharmacology
Victorian College of Pharmacy, Monash University
381 Royal Parade, Parkville VIC 3010
dallas.warren at vcp.monash.edu.au
+61 3 9903 9083
When the only tool you own is a hammer, every problem begins to resemble a nail.
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