[gmx-users] ewald,pme + bham potentials
David
spoel at xray.bmc.uu.se
Wed Jan 21 20:24:00 CET 2004
On Thu, 2004-01-22 at 11:15, gmx at 4ka.mipt.ru wrote:
> > > > Is it an infinite crystal (i.e. with PBC)?
> > >
> > > Yes, it is.
> >
> > The energy shows that it is the coulomb interactions. Do you have a
> > number of exclusions set to something reasonable (2-3)? Are there
> > chemical bonds between the atoms in your topology? Or constraints?
>
> No bonds, no constrains.
>
> My top:
OK, I think your best bet is a table lookup potential. Check archives,
manual, and maybe even the code (tables.c)
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assist. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
spoel at xray.bmc.uu.se spoel at gromacs.org http://xray.bmc.uu.se/~spoel
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
More information about the gromacs.org_gmx-users
mailing list