[gmx-users] (no subject)

[Zhen Qin]

I think you can add frozen the other residues by add a posre.itp, and add
include that file in your protein.top file.

the protein.top file looks like:

#include "ffgmx.itp"
#include "protein.itp"
#include "posre.itp"
#include "flexspc.itp"

[ system ]
protein_sol

[ molecules ]
protein    1
SOL     1234


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  H~a~v~e a g~o~o~d d~a~y  *^_^*
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On Thu, 3 Jun 2004, sara pistolesi wrote:

> Hi, I'm Sara.
> I have to perform a MD on a protein of 88 residues and I need to run my
> simulation only on four residues. I'm not expert with GROMACS so I don't
> know what I have to do: have you any suggestions?Thank you very much,
> Sara.
>
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