[gmx-users] problem generating topology file with pdb2gmx

[David van der Spoel]

On Wed, 2004-06-09 at 01:30, Bamidele Adisa wrote:
> i'm trying to generate a topology file using pdb2gmx and the program
> just stops after opening the .atp file as shown below
> 
> Using ffdeleopls force field
> Opening library file /usr/local/gromacs-3.1.4-mpi-sgl/share/top/ffdeleopls.atp
> Atomtype 697
run with -debug and check the pdb2gmx.log file.
by the way that is not an "official" force field 
> 
> nothing happens next...
> 
> could someone be of help?
> thanks
> dele
> 
> 
> 
> 
> ______________________
> Bamidele Adisa
> Dept of Chemical Engineering
> Clemson University
> Clemson, SC 29634-0909
> 864-654-0586
> ______________________
> 
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-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone:  +46 18 471 4205  fax: +46 18 511 755
spoel at xray.bmc.uu.se    spoel at gromacs.org   http://xray.bmc.uu.se/~spoel
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